BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014C11LP1|AL426665
(830 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1645 0.0
>3x_Contig1795
Length = 38452
Score = 1645 bits (830), Expect = 0.0
Identities = 830/830 (100%)
Strand = Plus / Minus
Query: 1 catcgcaccatatctaatttttaataatagtacaccaagaacataaattattcttgttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17648 catcgcaccatatctaatttttaataatagtacaccaagaacataaattattcttgttac 17589
Query: 61 atggaataatggcatagatgcaatcaagtccggagtaagtttgaagaaatagttgaacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17588 atggaataatggcatagatgcaatcaagtccggagtaagtttgaagaaatagttgaacgt 17529
Query: 121 tgccaagcactttgtcaagcagtttttaaatgcatcttctacgtatgctggtaattcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17528 tgccaagcactttgtcaagcagtttttaaatgcatcttctacgtatgctggtaattcttg 17469
Query: 181 caactcaaatttatcctccatagttttaggttggaaataatctattagaatggattcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17468 caactcaaatttatcctccatagttttaggttggaaataatctattagaatggattcata 17409
Query: 241 aagatatgcatataccgaattgaaaaatgccaaaatacggtgtttttctggtggaatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17408 aagatatgcatataccgaattgaaaaatgccaaaatacggtgtttttctggtggaatttc 17349
Query: 301 gggataaatagcatccaatgaatctttcatcttttcaataaatttctcgttatcgatagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17348 gggataaatagcatccaatgaatctttcatcttttcaataaatttctcgttatcgatagt 17289
Query: 361 aatatatgtgttttccataaccccagaagccaattgaatatgagtatgaatcagttctaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17288 aatatatgtgttttccataaccccagaagccaattgaatatgagtatgaatcagttctaa 17229
Query: 421 gcaatgattaattctcgcgaaaattacgaagagcttatcatcttcaaatccgtatatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17228 gcaatgattaattctcgcgaaaattacgaagagcttatcatcttcaaatccgtatatttt 17169
Query: 481 cgaaggatactgaccattcaagagtccttcacagaacgtgtcaaattttggggaccatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17168 cgaaggatactgaccattcaagagtccttcacagaacgtgtcaaattttggggaccatct 17109
Query: 541 caattgaattggctgcctcaagaatatggaaatattcaaacccgacacatatataaccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17108 caattgaattggctgcctcaagaatatggaaatattcaaacccgacacatatataaccaa 17049
Query: 601 aaccatccgataaaattcgtcgtcatattcaggatctttcttctctgggaccatgttctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17048 aaccatccgataaaattcgtcgtcatattcaggatctttcttctctgggaccatgttctg 16989
Query: 661 ttgcgcagagtccatcatatccattagtctgttgttaccgttcaaatcgaaatctctgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16988 ttgcgcagagtccatcatatccattagtctgttgttaccgttcaaatcgaaatctctgat 16929
Query: 721 ggcagagcagcatatataattgaagtagtgatacctggtctgattattccattctgagaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16928 ggcagagcagcatatataattgaagtagtgatacctggtctgattattccattctgagaa 16869
Query: 781 attataccataaacataaaaccaacaaggaacggattagttctgtgctct 830
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16868 attataccataaacataaaaccaacaaggaacggattagttctgtgctct 16819
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7748
Number of Sequences: 1807
Number of extensions: 7748
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 830
length of database: 10,358,551
effective HSP length: 16
effective length of query: 814
effective length of database: 10,329,639
effective search space: 8408326146
effective search space used: 8408326146
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)